micca
latest
Getting Started
Install
Supported databases
Tutorials
Paired-end sequencing - 97% OTU
Denoising (Illumina only)
Single-end sequencing
An introduction to the downstream analysis with R and phyloseq
Compute basic statistics, rarefy and summarize OTU/SV tables using micca
Picking OTUs for use in PICRUSt
In Depth
OTU picking and Denoising
Supported file formats
Changes
Command reference
classify
convert
filter
filterstats
merge
mergepairs
msa
otu
root
split
stats
tablebar
tablerare
tablestats
tabletotax
tobiom
tree
trim
micca
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